Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Hoxa6P09092 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxa6P09092 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxa6P09092 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa6P09092 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa6P09092 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hoxa6P09092 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.9□□□□□ -0.5
Hoxa6P09092 Gm12138-201ENSMUST00000122180 951 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 Gm28911-201ENSMUST00000188837 117 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxa6P09092 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.9□□□□□ -0.5
Hoxa6P09092 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.9□□□□□ -0.5
Hoxa6P09092 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxa6P09092 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa6P09092 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa6P09092 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa6P09092 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.51
Hoxa6P09092 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Hoxa6P09092 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hoxa6P09092 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm8927-201ENSMUST00000181978 981 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm19078-201ENSMUST00000206311 727 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm3222-201ENSMUST00000071282 990 ntBASIC11.89□□□□□ -0.51
Hoxa6P09092 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hoxa6P09092 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hoxa6P09092 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms