Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Col4a2P08122 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.61□□□□□ -0.39
Col4a2P08122 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a2P08122 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Col4a2P08122 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.6□□□□□ -0.39
Col4a2P08122 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm38144-201ENSMUST00000192790 465 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Col4a2P08122 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.6□□□□□ -0.39
Col4a2P08122 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.6□□□□□ -0.39
Col4a2P08122 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col4a2P08122 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col4a2P08122 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm25261-201ENSMUST00000157416 134 ntBASIC12.59□□□□□ -0.39
Col4a2P08122 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm6222-202ENSMUST00000182143 629 ntBASIC12.59□□□□□ -0.39
Col4a2P08122 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm37466-201ENSMUST00000195692 652 ntBASIC12.59□□□□□ -0.39
Col4a2P08122 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.59□□□□□ -0.39
Col4a2P08122 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.59□□□□□ -0.39
Col4a2P08122 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.59□□□□□ -0.39
Col4a2P08122 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC12.59□□□□□ -0.39
Col4a2P08122 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm3890-201ENSMUST00000182416 207 ntBASIC12.59□□□□□ -0.39
Col4a2P08122 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.59□□□□□ -0.39
Col4a2P08122 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col4a2P08122 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.59□□□□□ -0.39
Col4a2P08122 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col4a2P08122 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col4a2P08122 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col4a2P08122 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a2P08122 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Col4a2P08122 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a2P08122 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col4a2P08122 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col4a2P08122 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.58□□□□□ -0.4
Col4a2P08122 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col4a2P08122 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.58□□□□□ -0.4
Col4a2P08122 Gm16202-201ENSMUST00000117532 544 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms