Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm12585-201ENSMUST00000117307 290 ntBASIC13.92□□□□□ -0.18
Dnmt3aO88508 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.92□□□□□ -0.18
Dnmt3aO88508 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.92□□□□□ -0.18
Dnmt3aO88508 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.92□□□□□ -0.18
Dnmt3aO88508 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Dnmt3aO88508 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.91□□□□□ -0.18
Dnmt3aO88508 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Gm27838-201ENSMUST00000184829 128 ntBASIC13.91□□□□□ -0.18
Dnmt3aO88508 Gm21470-201ENSMUST00000187680 696 ntBASIC13.91□□□□□ -0.18
Dnmt3aO88508 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.91□□□□□ -0.18
Dnmt3aO88508 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.91□□□□□ -0.18
Dnmt3aO88508 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Dnmt3aO88508 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.9□□□□□ -0.18
Dnmt3aO88508 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Dnmt3aO88508 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Dnmt3aO88508 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Dnmt3aO88508 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Dnmt3aO88508 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.9□□□□□ -0.19
Dnmt3aO88508 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dnmt3aO88508 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Dnmt3aO88508 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dnmt3aO88508 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.89□□□□□ -0.19
Dnmt3aO88508 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dnmt3aO88508 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.89□□□□□ -0.19
Dnmt3aO88508 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Dnmt3aO88508 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dnmt3aO88508 Gm14719-201ENSMUST00000121891 340 ntBASIC13.89□□□□□ -0.19
Dnmt3aO88508 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Dnmt3aO88508 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms