Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cfdp1O88271 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.18■□□□□ 0.34
Cfdp1O88271 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cfdp1O88271 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Gm26464-201ENSMUST00000157094 305 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.18■□□□□ 0.34
Cfdp1O88271 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.18■□□□□ 0.34
Cfdp1O88271 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 AC192088.1-201ENSMUST00000227561 301 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.18■□□□□ 0.34
Cfdp1O88271 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.18■□□□□ 0.34
Cfdp1O88271 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfdp1O88271 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.18■□□□□ 0.34
Cfdp1O88271 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Gm12485-201ENSMUST00000119641 291 ntBASIC17.17■□□□□ 0.34
Cfdp1O88271 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.17■□□□□ 0.34
Cfdp1O88271 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.17■□□□□ 0.34
Cfdp1O88271 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Cfdp1O88271 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.17■□□□□ 0.34
Cfdp1O88271 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfdp1O88271 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Gm27701-201ENSMUST00000184498 110 ntBASIC17.16■□□□□ 0.34
Cfdp1O88271 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Gm28911-201ENSMUST00000188837 117 ntBASIC17.16■□□□□ 0.34
Cfdp1O88271 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cfdp1O88271 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Cfdp1O88271 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfdp1O88271 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Cfdp1O88271 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfdp1O88271 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.15■□□□□ 0.34
Cfdp1O88271 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.15■□□□□ 0.34
Cfdp1O88271 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfdp1O88271 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfdp1O88271 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfdp1O88271 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfdp1O88271 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.15■□□□□ 0.34
Cfdp1O88271 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfdp1O88271 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms