Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm8584-201ENSMUST00000171982 758 ntBASIC12.83□□□□□ -0.36
BckdkO55028 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Gm24694-201ENSMUST00000180054 110 ntBASIC12.83□□□□□ -0.36
BckdkO55028 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Gm27663-201ENSMUST00000184839 110 ntBASIC12.83□□□□□ -0.36
BckdkO55028 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.83□□□□□ -0.36
BckdkO55028 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.83□□□□□ -0.36
BckdkO55028 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.83□□□□□ -0.36
BckdkO55028 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
BckdkO55028 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.83□□□□□ -0.36
BckdkO55028 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Acot6-202ENSMUST00000222921 3622 ntBASIC12.83□□□□□ -0.36
BckdkO55028 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
BckdkO55028 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
BckdkO55028 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.83□□□□□ -0.36
BckdkO55028 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
BckdkO55028 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.82□□□□□ -0.36
BckdkO55028 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.82□□□□□ -0.36
BckdkO55028 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.82□□□□□ -0.36
BckdkO55028 Gm44855-201ENSMUST00000205725 362 ntBASIC12.82□□□□□ -0.36
BckdkO55028 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.82□□□□□ -0.36
BckdkO55028 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Gm9229-201ENSMUST00000222777 126 ntBASIC12.82□□□□□ -0.36
BckdkO55028 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
BckdkO55028 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
BckdkO55028 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.82□□□□□ -0.36
BckdkO55028 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.82□□□□□ -0.36
BckdkO55028 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
BckdkO55028 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.82□□□□□ -0.36
BckdkO55028 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.82□□□□□ -0.36
BckdkO55028 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
BckdkO55028 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.81□□□□□ -0.36
BckdkO55028 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.81□□□□□ -0.36
BckdkO55028 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.81□□□□□ -0.36
BckdkO55028 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.81□□□□□ -0.36
BckdkO55028 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
BckdkO55028 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.81□□□□□ -0.36
BckdkO55028 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BckdkO55028 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BckdkO55028 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms