Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Gm18041-201ENSMUST00000218210 618 ntBASIC12.59□□□□□ -0.39
Shisa8J3QNX5 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.59□□□□□ -0.39
Shisa8J3QNX5 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shisa8J3QNX5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shisa8J3QNX5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Shisa8J3QNX5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shisa8J3QNX5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Shisa8J3QNX5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Shisa8J3QNX5 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Rpph1-201ENSMUST00000175096 319 ntBASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Shisa8J3QNX5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Gm6973-201ENSMUST00000117080 721 ntBASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Gm27741-201ENSMUST00000185060 237 ntBASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Shisa8J3QNX5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms