Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC19.05■□□□□ 0.64
Hfm1D3Z4R1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Gm14028-201ENSMUST00000117434 479 ntBASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Gm18615-201ENSMUST00000222919 1031 ntBASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC19.04■□□□□ 0.64
Hfm1D3Z4R1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Gm25214-201ENSMUST00000104573 129 ntBASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Gm7857-201ENSMUST00000117957 358 ntBASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 n-R5s77-201ENSMUST00000083757 119 ntBASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hfm1D3Z4R1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Gm9856-201ENSMUST00000217077 2578 ntBASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Gm8176-201ENSMUST00000191297 1099 ntBASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Gm13097-201ENSMUST00000210722 397 ntBASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hfm1D3Z4R1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hfm1D3Z4R1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hfm1D3Z4R1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hfm1D3Z4R1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Hfm1D3Z4R1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 AA914427-201ENSMUST00000193194 1166 ntBASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hfm1D3Z4R1 Gm10782-202ENSMUST00000223775 1480 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms