Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm12585-201ENSMUST00000117307 290 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm43703-201ENSMUST00000200523 763 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm20445-201ENSMUST00000061905 565 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.51□□□□□ -0.41
Gm3543D3Z235 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Gm3543D3Z235 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.5□□□□□ -0.41
Gm3543D3Z235 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gm15957-201ENSMUST00000118893 974 ntBASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gm15393-201ENSMUST00000120499 219 ntBASIC12.5□□□□□ -0.41
Gm3543D3Z235 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.5□□□□□ -0.41
Gm3543D3Z235 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Syt7-205ENSMUST00000224135 1557 ntBASIC12.5□□□□□ -0.41
Gm3543D3Z235 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.5□□□□□ -0.41
Gm3543D3Z235 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Gm3543D3Z235 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Gm3543D3Z235 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Gm3543D3Z235 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms