Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hmgn3Q9DCB1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hmgn3Q9DCB1 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm11764-201ENSMUST00000120221 623 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm7230-201ENSMUST00000173026 815 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm44608-201ENSMUST00000206827 855 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Pck2-205ENSMUST00000226352 2784 ntBASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hmgn3Q9DCB1 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hmgn3Q9DCB1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms