Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vps28Q9D1C8 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps28Q9D1C8 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.16□□□□□ -0.14
Vps28Q9D1C8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps28Q9D1C8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps28Q9D1C8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms