Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.5□□□□□ -0.25
Msh4Q99MT2 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.5□□□□□ -0.25
Msh4Q99MT2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Mir125a-201ENSMUST00000083545 68 ntBASIC13.5□□□□□ -0.25
Msh4Q99MT2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.5□□□□□ -0.25
Msh4Q99MT2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.5□□□□□ -0.25
Msh4Q99MT2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.5□□□□□ -0.25
Msh4Q99MT2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Msh4Q99MT2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.49□□□□□ -0.25
Msh4Q99MT2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.49□□□□□ -0.25
Msh4Q99MT2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gm15653-201ENSMUST00000119247 907 ntBASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gm12428-201ENSMUST00000119844 727 ntBASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 AA619741-201ENSMUST00000195095 646 ntBASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Msh4Q99MT2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Gm27321-201ENSMUST00000185021 205 ntBASIC13.48□□□□□ -0.25
Msh4Q99MT2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Msh4Q99MT2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Msh4Q99MT2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms