Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.96□□□□□ -0.17
Rpa1Q8VEE4 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa1Q8VEE4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa1Q8VEE4 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rpa1Q8VEE4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rpa1Q8VEE4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Gm13597-201ENSMUST00000121239 375 ntBASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rpa1Q8VEE4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rpa1Q8VEE4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Gm13036-201ENSMUST00000117799 748 ntBASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.93□□□□□ -0.18
Rpa1Q8VEE4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Rpa1Q8VEE4 Gm12882-201ENSMUST00000121696 517 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms