Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gm7775-201ENSMUST00000218871 853 ntBASIC13.07□□□□□ -0.32
Clrn1Q8K445 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.07□□□□□ -0.32
Clrn1Q8K445 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clrn1Q8K445 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.06□□□□□ -0.32
Clrn1Q8K445 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Clrn1Q8K445 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.05□□□□□ -0.32
Clrn1Q8K445 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Gm12585-201ENSMUST00000117307 290 ntBASIC13.05□□□□□ -0.32
Clrn1Q8K445 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.05□□□□□ -0.32
Clrn1Q8K445 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Gm27989-201ENSMUST00000184721 107 ntBASIC13.05□□□□□ -0.32
Clrn1Q8K445 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Clrn1Q8K445 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Gm4875-201ENSMUST00000118257 786 ntBASIC13.04□□□□□ -0.32
Clrn1Q8K445 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Gm2445-201ENSMUST00000182798 989 ntBASIC13.04□□□□□ -0.32
Clrn1Q8K445 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.04□□□□□ -0.32
Clrn1Q8K445 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Clrn1Q8K445 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms