Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gm28630-201ENSMUST00000187806 498 ntBASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gm5312-201ENSMUST00000203728 547 ntBASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gm5779-201ENSMUST00000218467 910 ntBASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.37■□□□□ 0.21
Cchcr1Q8K2I2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Mir698-201ENSMUST00000102164 109 ntBASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Gm6415-201ENSMUST00000118488 348 ntBASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Gm25925-201ENSMUST00000158314 306 ntBASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cchcr1Q8K2I2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Mir449b-201ENSMUST00000104833 80 ntBASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cchcr1Q8K2I2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cchcr1Q8K2I2 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms