Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rfwd3Q8CIK8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm12151-201ENSMUST00000121374 290 ntBASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rfwd3Q8CIK8 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Rfwd3Q8CIK8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfwd3Q8CIK8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.02□□□□□ -0.32
Rfwd3Q8CIK8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfwd3Q8CIK8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rfwd3Q8CIK8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gm12585-201ENSMUST00000117307 290 ntBASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gm8584-201ENSMUST00000171982 758 ntBASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rfwd3Q8CIK8 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm4875-201ENSMUST00000118257 786 ntBASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm15393-201ENSMUST00000120499 219 ntBASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm37714-201ENSMUST00000194742 342 ntBASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.01□□□□□ -0.33
Rfwd3Q8CIK8 Gm18027-201ENSMUST00000218947 619 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms