Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rbm28Q8CGC6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Gm43438-201ENSMUST00000198133 379 ntBASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Rbm28Q8CGC6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rbm28Q8CGC6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Gm15240-201ENSMUST00000118156 720 ntBASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Gm27701-201ENSMUST00000184498 110 ntBASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rbm28Q8CGC6 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rbm28Q8CGC6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms