Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Prpf31Q8CCF0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gm15678-201ENSMUST00000117573 960 ntBASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Prpf31Q8CCF0 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm27772-201ENSMUST00000184900 187 ntBASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Prpf31Q8CCF0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Gm11524-201ENSMUST00000119349 807 ntBASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Gm15376-201ENSMUST00000122258 783 ntBASIC15.09■□□□□ 0.01
Prpf31Q8CCF0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms