Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm27437-201ENSMUST00000183429 107 ntBASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm7775-201ENSMUST00000218871 853 ntBASIC12.32□□□□□ -0.44
Ube3dQ8BX13 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ube3dQ8BX13 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Gm27631-201ENSMUST00000184163 466 ntBASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Acot6-202ENSMUST00000222921 3622 ntBASIC12.31□□□□□ -0.44
Ube3dQ8BX13 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.31□□□□□ -0.44
Ube3dQ8BX13 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ube3dQ8BX13 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Dupd1-202ENSMUST00000224735 548 ntBASIC12.3□□□□□ -0.44
Ube3dQ8BX13 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.3□□□□□ -0.44
Ube3dQ8BX13 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms