Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SynbQ8BI41 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SynbQ8BI41 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.25□□□□□ -0.29
SynbQ8BI41 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gm11918-201ENSMUST00000121660 179 ntBASIC13.25□□□□□ -0.29
SynbQ8BI41 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.25□□□□□ -0.29
SynbQ8BI41 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gm44719-201ENSMUST00000206404 149 ntBASIC13.25□□□□□ -0.29
SynbQ8BI41 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Acot6-202ENSMUST00000222921 3622 ntBASIC13.25□□□□□ -0.29
SynbQ8BI41 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
SynbQ8BI41 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SynbQ8BI41 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Gm12585-201ENSMUST00000117307 290 ntBASIC13.24□□□□□ -0.29
SynbQ8BI41 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Gm13829-201ENSMUST00000119600 138 ntBASIC13.24□□□□□ -0.29
SynbQ8BI41 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.24□□□□□ -0.29
SynbQ8BI41 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SynbQ8BI41 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SynbQ8BI41 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SynbQ8BI41 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SynbQ8BI41 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.23□□□□□ -0.29
SynbQ8BI41 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
SynbQ8BI41 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.23□□□□□ -0.29
SynbQ8BI41 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms