Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Nsd1-205ENSMUST00000224693 852 ntBASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trnp1Q80ZI1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm8793-201ENSMUST00000183069 1303 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm16505-201ENSMUST00000179981 232 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm3890-201ENSMUST00000182416 207 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm43138-201ENSMUST00000199123 708 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Rps4l-202ENSMUST00000204242 789 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trnp1Q80ZI1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm8805-201ENSMUST00000117848 313 ntBASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm11222-201ENSMUST00000119005 738 ntBASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm11964-201ENSMUST00000120982 444 ntBASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm44069-201ENSMUST00000204898 506 ntBASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trnp1Q80ZI1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms