Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Prpf38bQ80SY5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm15678-201ENSMUST00000117573 960 ntBASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm12341-201ENSMUST00000119724 503 ntBASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm6222-201ENSMUST00000120787 396 ntBASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Prpf38bQ80SY5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Gm13464-201ENSMUST00000119418 935 ntBASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.48□□□□□ -0.09
Prpf38bQ80SY5 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Gm37466-201ENSMUST00000195692 652 ntBASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Prpf38bQ80SY5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms