Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rnf220Q6PDX6 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Rnf220Q6PDX6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf220Q6PDX6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf220Q6PDX6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf220Q6PDX6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf220Q6PDX6 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rnf220Q6PDX6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Gm7862-201ENSMUST00000121461 292 ntBASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Gm18246-201ENSMUST00000221023 728 ntBASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rnf220Q6PDX6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf220Q6PDX6 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms