Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcc2Q6PDG5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Gm15460-201ENSMUST00000118147 391 ntBASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Syt7-204ENSMUST00000223586 1344 ntBASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcc2Q6PDG5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Gm16215-201ENSMUST00000161990 637 ntBASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Gm5866-201ENSMUST00000177881 973 ntBASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcc2Q6PDG5 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcc2Q6PDG5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms