Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sp140Q6NSQ5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp140Q6NSQ5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gm15653-201ENSMUST00000119247 907 ntBASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gm25144-201ENSMUST00000179561 110 ntBASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gm25352-201ENSMUST00000179815 110 ntBASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp140Q6NSQ5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Gm9229-201ENSMUST00000222777 126 ntBASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sp140Q6NSQ5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
Sp140Q6NSQ5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms