Protein–RNA interactions for Protein: Q60722

Tcf4, Transcription factor 4, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcf4Q60722 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Tcf4Q60722 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Tcf4Q60722 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tcf4Q60722 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Tcf4Q60722 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tcf4Q60722 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm27321-201ENSMUST00000185021 205 ntBASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm21470-201ENSMUST00000187680 696 ntBASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.4□□□□□ -0.1
Tcf4Q60722 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.4□□□□□ -0.1
Tcf4Q60722 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Tcf4Q60722 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Tcf4Q60722 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 Gm7775-201ENSMUST00000218871 853 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
Tcf4Q60722 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.39□□□□□ -0.11
Tcf4Q60722 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Tcf4Q60722 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Tcf4Q60722 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.38□□□□□ -0.11
Tcf4Q60722 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Tcf4Q60722 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tcf4Q60722 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms