Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Gm8927-201ENSMUST00000181978 981 ntBASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Gm3222-201ENSMUST00000071282 990 ntBASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdkl5Q3UTQ8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm15920-201ENSMUST00000118998 402 ntBASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm13385-201ENSMUST00000121089 220 ntBASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm27306-201ENSMUST00000183970 107 ntBASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdkl5Q3UTQ8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Gm4875-201ENSMUST00000118257 786 ntBASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.02■□□□□ 0.16
Cdkl5Q3UTQ8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdkl5Q3UTQ8 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Gm6912-201ENSMUST00000117218 544 ntBASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Gm24420-201ENSMUST00000176676 59 ntBASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdkl5Q3UTQ8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkl5Q3UTQ8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkl5Q3UTQ8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cdkl5Q3UTQ8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms