Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Gm18054-201ENSMUST00000207539 555 ntBASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Itm2b-204ENSMUST00000228637 783 ntBASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Upf3aQ3ULJ3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Gm43179-201ENSMUST00000198797 275 ntBASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Upf3aQ3ULJ3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm38144-201ENSMUST00000192790 465 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm7399-201ENSMUST00000032395 858 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Olfr582-201ENSMUST00000098212 960 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.47□□□□□ -0.09
Upf3aQ3ULJ3 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms