Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.94□□□□□ -0.02
Col9a2Q07643 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.94□□□□□ -0.02
Col9a2Q07643 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a2Q07643 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.93□□□□□ -0.02
Col9a2Q07643 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.93□□□□□ -0.02
Col9a2Q07643 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.93□□□□□ -0.02
Col9a2Q07643 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.93□□□□□ -0.02
Col9a2Q07643 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.93□□□□□ -0.02
Col9a2Q07643 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.93□□□□□ -0.02
Col9a2Q07643 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Gm10012-201ENSMUST00000078252 192 ntBASIC14.93□□□□□ -0.02
Col9a2Q07643 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Col9a2Q07643 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a2Q07643 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Gm43630-201ENSMUST00000201550 776 ntBASIC14.92□□□□□ -0.02
Col9a2Q07643 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.92□□□□□ -0.02
Col9a2Q07643 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.92□□□□□ -0.02
Col9a2Q07643 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a2Q07643 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.92□□□□□ -0.02
Col9a2Q07643 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col9a2Q07643 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col9a2Q07643 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.91□□□□□ -0.02
Col9a2Q07643 Gm11803-201ENSMUST00000119966 444 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms