Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Rpl39P62892 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Rpl39P62892 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Rpl39P62892 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Rpl39P62892 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Rpl39P62892 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Gm34391-201ENSMUST00000203706 907 ntBASIC9.86□□□□□ -0.83
Rpl39P62892 Klk2-ps-201ENSMUST00000205342 571 ntBASIC9.86□□□□□ -0.83
Rpl39P62892 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.86□□□□□ -0.83
Rpl39P62892 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC9.86□□□□□ -0.83
Rpl39P62892 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.86□□□□□ -0.83
Rpl39P62892 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC9.86□□□□□ -0.83
Rpl39P62892 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.86□□□□□ -0.83
Rpl39P62892 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Rpl39P62892 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Rpl39P62892 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.86□□□□□ -0.83
Rpl39P62892 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Rpl39P62892 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Rpl39P62892 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Rpl39P62892 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.85□□□□□ -0.83
Rpl39P62892 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Gm13036-201ENSMUST00000117799 748 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Gm15483-201ENSMUST00000120338 456 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.85□□□□□ -0.83
Rpl39P62892 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Rpl39P62892 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.85□□□□□ -0.83
Rpl39P62892 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Birc2-201ENSMUST00000054878 378 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Rpl39P62892 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Gm7002-201ENSMUST00000221386 2165 ntBASIC9.85□□□□□ -0.83
Rpl39P62892 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Rpl39P62892 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.85□□□□□ -0.83
Rpl39P62892 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC9.85□□□□□ -0.83
Rpl39P62892 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Rpl39P62892 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Rpl39P62892 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Rpl39P62892 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.84□□□□□ -0.83
Rpl39P62892 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Rpl39P62892 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Gm7862-201ENSMUST00000121461 292 ntBASIC9.84□□□□□ -0.83
Rpl39P62892 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.84□□□□□ -0.83
Rpl39P62892 Gm28033-201ENSMUST00000184224 96 ntBASIC9.84□□□□□ -0.83
Rpl39P62892 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC9.84□□□□□ -0.83
Rpl39P62892 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC9.84□□□□□ -0.83
Rpl39P62892 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rpl39P62892 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms