Protein–RNA interactions for Protein: P58242

Smpdl3b, Acid sphingomyelinase-like phosphodiesterase 3b, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpdl3bP58242 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.01□□□□□ -0.17
Smpdl3bP58242 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.01□□□□□ -0.17
Smpdl3bP58242 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14□□□□□ -0.17
Smpdl3bP58242 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Smpdl3bP58242 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Gm7488-201ENSMUST00000117148 684 ntBASIC14□□□□□ -0.17
Smpdl3bP58242 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Smpdl3bP58242 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14□□□□□ -0.17
Smpdl3bP58242 Gm31326-201ENSMUST00000191856 1048 ntBASIC14□□□□□ -0.17
Smpdl3bP58242 Gm18905-201ENSMUST00000205454 928 ntBASIC14□□□□□ -0.17
Smpdl3bP58242 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Smpdl3bP58242 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14□□□□□ -0.17
Smpdl3bP58242 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smpdl3bP58242 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smpdl3bP58242 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smpdl3bP58242 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14□□□□□ -0.17
Smpdl3bP58242 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Gm24420-201ENSMUST00000176676 59 ntBASIC13.99□□□□□ -0.17
Smpdl3bP58242 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Smpdl3bP58242 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smpdl3bP58242 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.98□□□□□ -0.17
Smpdl3bP58242 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms