Protein–RNA interactions for Protein: P52795

Efnb1, Ephrin-B1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb1P52795 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.2□□□□□ -0.46
Efnb1P52795 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Efnb1P52795 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.2□□□□□ -0.46
Efnb1P52795 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Efnb1P52795 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Efnb1P52795 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Efnb1P52795 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.19□□□□□ -0.46
Efnb1P52795 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.19□□□□□ -0.46
Efnb1P52795 Gm27741-201ENSMUST00000185060 237 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Efnb1P52795 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.19□□□□□ -0.46
Efnb1P52795 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Efnb1P52795 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.19□□□□□ -0.46
Efnb1P52795 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Efnb1P52795 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Efnb1P52795 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.18□□□□□ -0.46
Efnb1P52795 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Efnb1P52795 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Efnb1P52795 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.18□□□□□ -0.46
Efnb1P52795 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Efnb1P52795 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Gm22065-201ENSMUST00000103753 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm22066-201ENSMUST00000103761 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm24932-201ENSMUST00000103763 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm24115-201ENSMUST00000103799 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm22190-201ENSMUST00000103827 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm22191-201ENSMUST00000103831 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm24721-201ENSMUST00000103849 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm28018-201ENSMUST00000103869 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Gm26399-201ENSMUST00000103937 110 ntBASIC12.18□□□□□ -0.46
Efnb1P52795 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Efnb1P52795 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Efnb1P52795 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.18□□□□□ -0.46
Efnb1P52795 Gm25349-201ENSMUST00000177728 110 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms