Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Gm13665-201ENSMUST00000120830 528 ntBASIC15.23■□□□□ 0.03
Brca1P48754 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Brca1P48754 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Gm38317-201ENSMUST00000195564 343 ntBASIC15.23■□□□□ 0.03
Brca1P48754 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.23■□□□□ 0.03
Brca1P48754 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Brca1P48754 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Brca1P48754 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Brca1P48754 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Brca1P48754 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.22■□□□□ 0.03
Brca1P48754 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.22■□□□□ 0.03
Brca1P48754 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Gm32025-201ENSMUST00000217960 307 ntBASIC15.22■□□□□ 0.03
Brca1P48754 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Gm22121-201ENSMUST00000175148 54 ntBASIC15.22■□□□□ 0.03
Brca1P48754 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.22■□□□□ 0.03
Brca1P48754 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Brca1P48754 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.22■□□□□ 0.03
Brca1P48754 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Brca1P48754 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Brca1P48754 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.21■□□□□ 0.03
Brca1P48754 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Brca1P48754 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.21■□□□□ 0.03
Brca1P48754 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brca1P48754 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brca1P48754 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.21■□□□□ 0.03
Brca1P48754 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.21■□□□□ 0.03
Brca1P48754 Gm14267-206ENSMUST00000226870 1209 ntBASIC15.21■□□□□ 0.03
Brca1P48754 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Brca1P48754 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Brca1P48754 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brca1P48754 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.2■□□□□ 0.02
Brca1P48754 Gm13461-201ENSMUST00000120980 662 ntBASIC15.2■□□□□ 0.02
Brca1P48754 Gm14277-201ENSMUST00000121195 360 ntBASIC15.2■□□□□ 0.02
Brca1P48754 Gm12566-201ENSMUST00000121479 359 ntBASIC15.2■□□□□ 0.02
Brca1P48754 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Brca1P48754 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Brca1P48754 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.2■□□□□ 0.02
Brca1P48754 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brca1P48754 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brca1P48754 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.2■□□□□ 0.02
Brca1P48754 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.2■□□□□ 0.02
Brca1P48754 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Brca1P48754 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.2■□□□□ 0.02
Brca1P48754 Gm19208-201ENSMUST00000213861 912 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms