Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HttP42859 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.37□□□□□ -0.11
HttP42859 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Gm17040-202ENSMUST00000170597 889 ntBASIC14.37□□□□□ -0.11
HttP42859 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.37□□□□□ -0.11
HttP42859 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.37□□□□□ -0.11
HttP42859 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.37□□□□□ -0.11
HttP42859 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HttP42859 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Gm13875-201ENSMUST00000120162 282 ntBASIC14.36□□□□□ -0.11
HttP42859 Gm16397-201ENSMUST00000122201 494 ntBASIC14.36□□□□□ -0.11
HttP42859 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
HttP42859 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.36□□□□□ -0.11
HttP42859 Mir6546-201ENSMUST00000184460 62 ntBASIC14.36□□□□□ -0.11
HttP42859 Gm3096-201ENSMUST00000185770 364 ntBASIC14.36□□□□□ -0.11
HttP42859 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HttP42859 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.36□□□□□ -0.11
HttP42859 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.36□□□□□ -0.11
HttP42859 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HttP42859 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HttP42859 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.35□□□□□ -0.11
HttP42859 Gm10051-201ENSMUST00000145209 414 ntBASIC14.35□□□□□ -0.11
HttP42859 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.35□□□□□ -0.11
HttP42859 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.35□□□□□ -0.11
HttP42859 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.35□□□□□ -0.11
HttP42859 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.35□□□□□ -0.11
HttP42859 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HttP42859 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.35□□□□□ -0.11
HttP42859 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Gm25043-201ENSMUST00000158604 212 ntBASIC14.35□□□□□ -0.11
HttP42859 Gm17391-201ENSMUST00000171036 126 ntBASIC14.35□□□□□ -0.11
HttP42859 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.35□□□□□ -0.11
HttP42859 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.35□□□□□ -0.11
HttP42859 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HttP42859 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HttP42859 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HttP42859 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HttP42859 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HttP42859 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HttP42859 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HttP42859 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.34□□□□□ -0.11
HttP42859 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.34□□□□□ -0.11
HttP42859 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HttP42859 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HttP42859 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.34□□□□□ -0.11
HttP42859 Gm12795-201ENSMUST00000117594 539 ntBASIC14.34□□□□□ -0.11
HttP42859 Gm9062-201ENSMUST00000117712 727 ntBASIC14.34□□□□□ -0.11
HttP42859 Gm11978-201ENSMUST00000122315 466 ntBASIC14.34□□□□□ -0.11
HttP42859 Gm26185-201ENSMUST00000157692 266 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms