Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Chd1P40201 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Chd1P40201 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Chd1P40201 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Chd1P40201 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Gm6963-201ENSMUST00000147879 379 ntBASIC20.3■□□□□ 0.84
Chd1P40201 Gm6254-201ENSMUST00000168178 1072 ntBASIC20.3■□□□□ 0.84
Chd1P40201 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd1P40201 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd1P40201 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd1P40201 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd1P40201 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd1P40201 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd1P40201 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd1P40201 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd1P40201 AC159819.2-201ENSMUST00000216151 342 ntBASIC20.29■□□□□ 0.84
Chd1P40201 AC099645.1-201ENSMUST00000226476 1105 ntBASIC20.29■□□□□ 0.84
Chd1P40201 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd1P40201 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd1P40201 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd1P40201 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC20.28■□□□□ 0.84
Chd1P40201 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC20.28■□□□□ 0.84
Chd1P40201 Nupl1-207ENSMUST00000225311 2475 ntBASIC20.28■□□□□ 0.84
Chd1P40201 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd1P40201 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd1P40201 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC20.28■□□□□ 0.84
Chd1P40201 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC20.28■□□□□ 0.84
Chd1P40201 Gm37905-201ENSMUST00000195310 341 ntBASIC20.28■□□□□ 0.84
Chd1P40201 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd1P40201 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC20.28■□□□□ 0.84
Chd1P40201 AC113031.8-201ENSMUST00000227856 631 ntBASIC20.28■□□□□ 0.84
Chd1P40201 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd1P40201 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1P40201 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC20.27■□□□□ 0.84
Chd1P40201 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC20.27■□□□□ 0.84
Chd1P40201 Gm11675-201ENSMUST00000121873 832 ntBASIC20.27■□□□□ 0.84
Chd1P40201 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC20.27■□□□□ 0.84
Chd1P40201 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC20.27■□□□□ 0.84
Chd1P40201 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC20.27■□□□□ 0.84
Chd1P40201 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1P40201 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd1P40201 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 Gm24845-201ENSMUST00000158034 109 ntBASIC20.27■□□□□ 0.83
Chd1P40201 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC20.27■□□□□ 0.83
Chd1P40201 Gm17812-201ENSMUST00000204935 318 ntBASIC20.27■□□□□ 0.83
Chd1P40201 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Chd1P40201 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Chd1P40201 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chd1P40201 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Chd1P40201 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 CT009713.10-201ENSMUST00000225013 1986 ntBASIC20.26■□□□□ 0.83
Chd1P40201 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC20.26■□□□□ 0.83
Chd1P40201 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chd1P40201 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms