Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LdlrP35951 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
LdlrP35951 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LdlrP35951 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LdlrP35951 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Gm11424-201ENSMUST00000121929 829 ntBASIC13.78□□□□□ -0.2
LdlrP35951 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.78□□□□□ -0.2
LdlrP35951 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.78□□□□□ -0.2
LdlrP35951 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.78□□□□□ -0.2
LdlrP35951 Gm18041-201ENSMUST00000218210 618 ntBASIC13.78□□□□□ -0.2
LdlrP35951 Gm5779-201ENSMUST00000218467 910 ntBASIC13.78□□□□□ -0.2
LdlrP35951 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LdlrP35951 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LdlrP35951 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.78□□□□□ -0.2
LdlrP35951 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LdlrP35951 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LdlrP35951 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
LdlrP35951 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LdlrP35951 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LdlrP35951 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LdlrP35951 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
LdlrP35951 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LdlrP35951 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Gm13223-201ENSMUST00000118609 747 ntBASIC13.77□□□□□ -0.21
LdlrP35951 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Gm2445-201ENSMUST00000182798 989 ntBASIC13.77□□□□□ -0.21
LdlrP35951 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Gm44608-201ENSMUST00000206827 855 ntBASIC13.77□□□□□ -0.21
LdlrP35951 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.77□□□□□ -0.21
LdlrP35951 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.77□□□□□ -0.21
LdlrP35951 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LdlrP35951 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LdlrP35951 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
LdlrP35951 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LdlrP35951 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LdlrP35951 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.76□□□□□ -0.21
LdlrP35951 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LdlrP35951 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LdlrP35951 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.76□□□□□ -0.21
LdlrP35951 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LdlrP35951 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.76□□□□□ -0.21
LdlrP35951 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.76□□□□□ -0.21
LdlrP35951 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LdlrP35951 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LdlrP35951 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms