Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.9□□□□□ -0.5
Slc6a1P31648 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Gm9682-201ENSMUST00000197505 556 ntBASIC11.9□□□□□ -0.5
Slc6a1P31648 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.9□□□□□ -0.5
Slc6a1P31648 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.9□□□□□ -0.5
Slc6a1P31648 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.9□□□□□ -0.5
Slc6a1P31648 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.9□□□□□ -0.5
Slc6a1P31648 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Slc6a1P31648 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc6a1P31648 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc6a1P31648 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Slc6a1P31648 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Slc6a1P31648 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
Slc6a1P31648 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm14494-201ENSMUST00000118786 435 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Mir3113-201ENSMUST00000175478 76 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm2451-201ENSMUST00000199447 999 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm10290-201ENSMUST00000200451 999 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.89□□□□□ -0.51
Slc6a1P31648 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Slc6a1P31648 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc6a1P31648 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.88□□□□□ -0.51
Slc6a1P31648 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.88□□□□□ -0.51
Slc6a1P31648 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc6a1P31648 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Slc6a1P31648 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms