Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Gm12490-201ENSMUST00000120255 560 ntBASIC12.54□□□□□ -0.4
VtnP29788 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Gm9522-201ENSMUST00000182394 926 ntBASIC12.54□□□□□ -0.4
VtnP29788 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VtnP29788 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.54□□□□□ -0.4
VtnP29788 Gm29741-201ENSMUST00000192667 421 ntBASIC12.54□□□□□ -0.4
VtnP29788 Gm42612-201ENSMUST00000197986 623 ntBASIC12.54□□□□□ -0.4
VtnP29788 Gm43438-201ENSMUST00000198133 379 ntBASIC12.54□□□□□ -0.4
VtnP29788 Gm43170-201ENSMUST00000199827 612 ntBASIC12.54□□□□□ -0.4
VtnP29788 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.54□□□□□ -0.4
VtnP29788 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.54□□□□□ -0.4
VtnP29788 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.54□□□□□ -0.4
VtnP29788 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VtnP29788 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Gm22189-201ENSMUST00000103822 86 ntBASIC12.53□□□□□ -0.4
VtnP29788 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Gm6912-201ENSMUST00000117218 544 ntBASIC12.53□□□□□ -0.4
VtnP29788 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.53□□□□□ -0.4
VtnP29788 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.53□□□□□ -0.4
VtnP29788 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.53□□□□□ -0.4
VtnP29788 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VtnP29788 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.53□□□□□ -0.4
VtnP29788 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.53□□□□□ -0.4
VtnP29788 Gm20445-201ENSMUST00000061905 565 ntBASIC12.53□□□□□ -0.4
VtnP29788 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VtnP29788 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VtnP29788 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.53□□□□□ -0.4
VtnP29788 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.53□□□□□ -0.4
VtnP29788 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VtnP29788 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VtnP29788 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VtnP29788 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
VtnP29788 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VtnP29788 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
VtnP29788 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.52□□□□□ -0.4
VtnP29788 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VtnP29788 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms