Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1bP25119 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1bP25119 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tnfrsf1bP25119 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm2445-201ENSMUST00000182798 989 ntBASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm17795-201ENSMUST00000214505 757 ntBASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm6218-201ENSMUST00000219812 628 ntBASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf1bP25119 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Mir698-201ENSMUST00000102164 109 ntBASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gm6912-201ENSMUST00000117218 544 ntBASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gm5866-201ENSMUST00000177881 973 ntBASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gm28760-201ENSMUST00000185995 736 ntBASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.8□□□□□ -0.36
Tnfrsf1bP25119 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1bP25119 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms