Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Gm12416-201ENSMUST00000120911 1008 ntBASIC20.49■□□□□ 0.87
NclP09405 Gm15429-201ENSMUST00000151268 798 ntBASIC20.49■□□□□ 0.87
NclP09405 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Gm5069-202ENSMUST00000192714 1011 ntBASIC20.49■□□□□ 0.87
NclP09405 Gm17794-201ENSMUST00000220252 955 ntBASIC20.49■□□□□ 0.87
NclP09405 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NclP09405 Gm21038-201ENSMUST00000222205 1383 ntBASIC20.48■□□□□ 0.87
NclP09405 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NclP09405 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NclP09405 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Gm6244-201ENSMUST00000178732 841 ntBASIC20.48■□□□□ 0.87
NclP09405 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Gm2495-201ENSMUST00000191160 466 ntBASIC20.48■□□□□ 0.87
NclP09405 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Gm6266-201ENSMUST00000203844 806 ntBASIC20.48■□□□□ 0.87
NclP09405 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.48■□□□□ 0.87
NclP09405 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC20.48■□□□□ 0.87
NclP09405 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NclP09405 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NclP09405 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NclP09405 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NclP09405 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC20.47■□□□□ 0.87
NclP09405 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NclP09405 Gm14730-201ENSMUST00000122378 1045 ntBASIC20.47■□□□□ 0.87
NclP09405 Mir1894-201ENSMUST00000122802 81 ntBASIC20.47■□□□□ 0.87
NclP09405 Gm7498-201ENSMUST00000203282 1084 ntBASIC20.47■□□□□ 0.87
NclP09405 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
NclP09405 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC20.47■□□□□ 0.87
NclP09405 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NclP09405 AC161252.3-201ENSMUST00000225465 1549 ntBASIC20.47■□□□□ 0.87
NclP09405 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NclP09405 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NclP09405 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NclP09405 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC20.46■□□□□ 0.87
NclP09405 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC20.46■□□□□ 0.87
NclP09405 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC20.46■□□□□ 0.87
NclP09405 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NclP09405 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC20.46■□□□□ 0.87
NclP09405 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NclP09405 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
NclP09405 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
NclP09405 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.45■□□□□ 0.86
NclP09405 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Gm38102-201ENSMUST00000192791 1935 ntBASIC20.45■□□□□ 0.86
NclP09405 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC20.45■□□□□ 0.86
NclP09405 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC20.45■□□□□ 0.86
NclP09405 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NclP09405 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms