Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.32□□□□□ -0.44
P06344 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
P06344 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
P06344 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
P06344 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.32□□□□□ -0.44
P06344 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.32□□□□□ -0.44
P06344 Gm17795-201ENSMUST00000214505 757 ntBASIC12.32□□□□□ -0.44
P06344 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
P06344 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.32□□□□□ -0.44
P06344 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
P06344 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
P06344 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
P06344 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
P06344 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.31□□□□□ -0.44
P06344 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.31□□□□□ -0.44
P06344 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
P06344 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.31□□□□□ -0.44
P06344 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.31□□□□□ -0.44
P06344 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.31□□□□□ -0.44
P06344 Gm37917-201ENSMUST00000194711 392 ntBASIC12.31□□□□□ -0.44
P06344 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.31□□□□□ -0.44
P06344 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.31□□□□□ -0.44
P06344 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P06344 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
P06344 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
P06344 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
P06344 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
P06344 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.31□□□□□ -0.44
P06344 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
P06344 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.3□□□□□ -0.44
P06344 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.3□□□□□ -0.44
P06344 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.3□□□□□ -0.44
P06344 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
P06344 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Gm15240-201ENSMUST00000118156 720 ntBASIC12.3□□□□□ -0.44
P06344 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.3□□□□□ -0.44
P06344 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
P06344 Gm13385-201ENSMUST00000121089 220 ntBASIC12.3□□□□□ -0.44
P06344 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
P06344 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.3□□□□□ -0.44
P06344 Gm19220-201ENSMUST00000222682 803 ntBASIC12.3□□□□□ -0.44
P06344 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.3□□□□□ -0.44
P06344 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.3□□□□□ -0.44
P06344 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
P06344 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
P06344 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms