Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.62□□□□□ -0.55
Hoxa3P02831 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.62□□□□□ -0.55
Hoxa3P02831 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Hoxa3P02831 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Hoxa3P02831 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.62□□□□□ -0.55
Hoxa3P02831 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Hoxa3P02831 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.61□□□□□ -0.55
Hoxa3P02831 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gm12490-201ENSMUST00000120255 560 ntBASIC11.61□□□□□ -0.55
Hoxa3P02831 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gm28760-201ENSMUST00000185995 736 ntBASIC11.61□□□□□ -0.55
Hoxa3P02831 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.61□□□□□ -0.55
Hoxa3P02831 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.61□□□□□ -0.55
Hoxa3P02831 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gm6180-201ENSMUST00000065243 498 ntBASIC11.61□□□□□ -0.55
Hoxa3P02831 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxa3P02831 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxa3P02831 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Gm23984-201ENSMUST00000157139 203 ntBASIC11.6□□□□□ -0.55
Hoxa3P02831 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Hoxa3P02831 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxa3P02831 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa3P02831 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa3P02831 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms