Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ptch2O35595 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ptch2O35595 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ptch2O35595 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ptch2O35595 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ptch2O35595 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ptch2O35595 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.16□□□□□ -0.14
Ptch2O35595 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.16□□□□□ -0.14
Ptch2O35595 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.16□□□□□ -0.14
Ptch2O35595 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.16□□□□□ -0.14
Ptch2O35595 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.16□□□□□ -0.14
Ptch2O35595 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Ptch2O35595 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ptch2O35595 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ptch2O35595 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ptch2O35595 Mir1894-201ENSMUST00000122802 81 ntBASIC14.16□□□□□ -0.14
Ptch2O35595 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Mir1982-201ENSMUST00000157368 74 ntBASIC14.16□□□□□ -0.14
Ptch2O35595 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.16□□□□□ -0.14
Ptch2O35595 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.16□□□□□ -0.14
Ptch2O35595 AC153962.4-201ENSMUST00000217878 242 ntBASIC14.16□□□□□ -0.14
Ptch2O35595 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.16□□□□□ -0.14
Ptch2O35595 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ptch2O35595 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ptch2O35595 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ptch2O35595 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
Ptch2O35595 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ptch2O35595 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ptch2O35595 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ptch2O35595 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 AY702102-202ENSMUST00000194651 1173 ntBASIC14.15□□□□□ -0.14
Ptch2O35595 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Gm9899-201ENSMUST00000065519 555 ntBASIC14.15□□□□□ -0.14
Ptch2O35595 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.15□□□□□ -0.14
Ptch2O35595 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ptch2O35595 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptch2O35595 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ptch2O35595 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptch2O35595 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ptch2O35595 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ptch2O35595 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms