Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ebf3O08791 Gm9396-201ENSMUST00000076703 567 ntBASIC14.37□□□□□ -0.11
Ebf3O08791 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ebf3O08791 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
Ebf3O08791 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf3O08791 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ebf3O08791 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ebf3O08791 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ebf3O08791 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.36□□□□□ -0.11
Ebf3O08791 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.36□□□□□ -0.11
Ebf3O08791 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.36□□□□□ -0.11
Ebf3O08791 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.36□□□□□ -0.11
Ebf3O08791 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.36□□□□□ -0.11
Ebf3O08791 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.36□□□□□ -0.11
Ebf3O08791 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ebf3O08791 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ebf3O08791 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ebf3O08791 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ebf3O08791 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf3O08791 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ebf3O08791 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ebf3O08791 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ebf3O08791 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf3O08791 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf3O08791 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.35□□□□□ -0.11
Ebf3O08791 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
Ebf3O08791 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.35□□□□□ -0.11
Ebf3O08791 Gm27892-201ENSMUST00000185017 106 ntBASIC14.35□□□□□ -0.11
Ebf3O08791 Gm5425-201ENSMUST00000214125 459 ntBASIC14.35□□□□□ -0.11
Ebf3O08791 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Ebf3O08791 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf3O08791 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf3O08791 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf3O08791 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms