Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcf11G3X9Z4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Gm37042-201ENSMUST00000193816 581 ntBASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcf11G3X9Z4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcf11G3X9Z4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Gm43822-201ENSMUST00000200285 476 ntBASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcf11G3X9Z4 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Gm38341-201ENSMUST00000195357 515 ntBASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Gm3961-201ENSMUST00000204425 994 ntBASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 CT009713.10-202ENSMUST00000225734 696 ntBASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcf11G3X9Z4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcf11G3X9Z4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms