Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nkx1-1G3UXB3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Gm15371-201ENSMUST00000117057 784 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Gm15370-201ENSMUST00000117158 253 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Gm14413-201ENSMUST00000122158 408 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Gm43094-201ENSMUST00000196549 921 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 AC109214.2-201ENSMUST00000220089 358 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 AC166830.1-201ENSMUST00000224201 533 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nkx1-1G3UXB3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 BC001981-202ENSMUST00000191393 1545 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm13813-201ENSMUST00000120998 787 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm5392-201ENSMUST00000122189 789 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm6621-201ENSMUST00000193251 772 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm37835-201ENSMUST00000193305 361 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Gm8023-201ENSMUST00000195298 903 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 AC157654.1-201ENSMUST00000224130 820 ntBASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Nkx1-1G3UXB3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm28011-201ENSMUST00000184097 175 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm28724-201ENSMUST00000186149 625 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm3489-201ENSMUST00000190083 528 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm43378-201ENSMUST00000199336 582 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 AC132881.1-201ENSMUST00000223780 1062 ntBASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx1-1G3UXB3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms