Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm12997-201ENSMUST00000120207 640 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm12749-201ENSMUST00000122138 1159 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm8927-201ENSMUST00000181978 981 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm29396-201ENSMUST00000185659 716 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm3222-201ENSMUST00000071282 990 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.58■□□□□ 0.24
NpcdF8VQB8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NpcdF8VQB8 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.57■□□□□ 0.24
NpcdF8VQB8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.57■□□□□ 0.24
NpcdF8VQB8 Gm24255-201ENSMUST00000104481 128 ntBASIC16.57■□□□□ 0.24
NpcdF8VQB8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Gm26927-201ENSMUST00000182385 965 ntBASIC16.57■□□□□ 0.24
NpcdF8VQB8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.57■□□□□ 0.24
NpcdF8VQB8 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.57■□□□□ 0.24
NpcdF8VQB8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NpcdF8VQB8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm12203-201ENSMUST00000118235 598 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm12209-201ENSMUST00000120089 596 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm25668-201ENSMUST00000157700 129 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm22902-201ENSMUST00000158488 302 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm2383-201ENSMUST00000181461 807 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm27341-201ENSMUST00000183570 106 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NpcdF8VQB8 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.56■□□□□ 0.24
NpcdF8VQB8 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.55■□□□□ 0.24
NpcdF8VQB8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.55■□□□□ 0.24
NpcdF8VQB8 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NpcdF8VQB8 Gm13786-201ENSMUST00000122371 333 ntBASIC16.55■□□□□ 0.24
NpcdF8VQB8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms