Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Chd3B1AR17 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.52□□□□□ -0.25
Chd3B1AR17 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd3B1AR17 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Chd3B1AR17 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.52□□□□□ -0.25
Chd3B1AR17 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gm17150-201ENSMUST00000165577 381 ntBASIC13.51□□□□□ -0.25
Chd3B1AR17 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chd3B1AR17 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.51□□□□□ -0.25
Chd3B1AR17 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chd3B1AR17 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.51□□□□□ -0.25
Chd3B1AR17 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Chd3B1AR17 Gm44719-201ENSMUST00000206404 149 ntBASIC13.51□□□□□ -0.25
Chd3B1AR17 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.51□□□□□ -0.25
Chd3B1AR17 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.51□□□□□ -0.25
Chd3B1AR17 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Chd3B1AR17 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.5□□□□□ -0.25
Chd3B1AR17 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
Chd3B1AR17 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm8602-201ENSMUST00000184045 607 ntBASIC13.5□□□□□ -0.25
Chd3B1AR17 Mir7085-201ENSMUST00000184353 66 ntBASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm27731-201ENSMUST00000185192 107 ntBASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm6007-201ENSMUST00000208170 823 ntBASIC13.5□□□□□ -0.25
Chd3B1AR17 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.5□□□□□ -0.25
Chd3B1AR17 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.5□□□□□ -0.25
Chd3B1AR17 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.5□□□□□ -0.25
Chd3B1AR17 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chd3B1AR17 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm24644-201ENSMUST00000157114 139 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm18062-201ENSMUST00000208020 547 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 Gm18055-201ENSMUST00000208254 547 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.49□□□□□ -0.25
Chd3B1AR17 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chd3B1AR17 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms