Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm12260-201ENSMUST00000122447 411 ntBASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.64□□□□□ -0.71
PdfS4R2K0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm27525-201ENSMUST00000184465 107 ntBASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Gm5184-201ENSMUST00000220417 1702 ntBASIC10.64□□□□□ -0.71
PdfS4R2K0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
PdfS4R2K0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Paupar-201ENSMUST00000194826 3482 ntBASIC10.63□□□□□ -0.71
PdfS4R2K0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.63□□□□□ -0.71
PdfS4R2K0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Gm11779-201ENSMUST00000118541 368 ntBASIC10.63□□□□□ -0.71
PdfS4R2K0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.63□□□□□ -0.71
PdfS4R2K0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC10.63□□□□□ -0.71
PdfS4R2K0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC10.63□□□□□ -0.71
PdfS4R2K0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
PdfS4R2K0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
PdfS4R2K0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
PdfS4R2K0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
PdfS4R2K0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
PdfS4R2K0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.62□□□□□ -0.71
PdfS4R2K0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.62□□□□□ -0.71
PdfS4R2K0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.62□□□□□ -0.71
PdfS4R2K0 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.62□□□□□ -0.71
PdfS4R2K0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
PdfS4R2K0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms