Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Gm44771-201ENSMUST00000206975 626 ntBASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.48□□□□□ -0.41
H2afb3S4R1G7 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm13823-201ENSMUST00000119930 345 ntBASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb3S4R1G7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.46□□□□□ -0.41
H2afb3S4R1G7 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.46□□□□□ -0.41
H2afb3S4R1G7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.46□□□□□ -0.41
H2afb3S4R1G7 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms