Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.33■□□□□ 0.37
Chmp5Q9D7S9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chmp5Q9D7S9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp5Q9D7S9 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Gm18057-201ENSMUST00000208220 503 ntBASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp5Q9D7S9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Gm13823-201ENSMUST00000119930 345 ntBASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Gm1401-201ENSMUST00000122048 772 ntBASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Gm5364-201ENSMUST00000216789 889 ntBASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms